| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 94 | Detail | | | | | | | | root [B. rapa] | plastid stroma | |
| 310 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr2-1:R2-TAPlong |
| 351 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 352 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 355 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 356 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 361 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 371 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 622 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 1127 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2k3 |
| 1202 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1207 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1208 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1345 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 1) |
| 1346 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 2) |
| 1347 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 3) |
| 1348 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 1) |
| 1349 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 2) |
| 1350 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 3) |
| 1356 | Detail | | | | | | | | leaf [A. thaliana] | total tissue - low mass region | wild-type |
| 1392 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1393 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 2) |
| 1394 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1396 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpt1xclpt2 (rep. 2) |
| 1397 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 3) |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1403 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1404 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1406 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1409 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | wild-type |
| 1410 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.2 | wild-type |
| 1411 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | clpr2-1 |
| 1412 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.2 | clpr2-1 |
| 1413 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue -114 rep1tR1 | wild-type |
| 1414 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue -114 rep1tR2 | wild-type |
| 1415 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 rep 1.1 | clpr2-1 |
| 1416 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 rep 1.2 | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1421 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1422 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 2) |
| 1423 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 3) |
| 1424 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 1) |
| 1425 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 2) |
| 1426 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 3) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1432 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1439 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 1) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1441 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 3) |
| 1442 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 1) |
| 1443 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 2) |
| 1444 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1445 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 1) |
| 1446 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 2) |
| 1447 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 3) |
| 1448 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | abck2xabck3 (rep. 1) |
| 1450 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1483 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 2) |
| 1485 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1486 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 3) |
| 1517 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1518 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1519 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1522 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1530 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | wild-type (rep. 1) |
| 1531 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | wild-type (rep. 1) |
| 1532 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | clps (rep. 1) |
| 1533 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | clps (rep. 1) |
| 1534 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | clps (rep. 1) |
| 1540 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids plastoglobule | wild-type |
| 1541 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids plastoglobule | M-48 |
| 1596 | Detail | | | | | | | | [A. thaliana] | | |
| 1620 | Detail | | | | | | | | [A. thaliana] | | m48 |
| 1651 | Detail | | | | | | | | leaf [A. thaliana] | plastoglobules plastoglobule | wild-type |
| 1748 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Col_0 |
| 1749 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 1756 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Col_0 |
| 1757 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 1828 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 Fluctuating light |
| 1829 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Met1-1 Fluctuating light |
| 1876 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wild-type |
| 1930 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Col_0 Wild-type |
| 1931 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 1932 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1942 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1945 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1946 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | wild-type |
| 1947 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2006 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2008 | Detail | | | | | | | | leaf [A. thaliana] | RNAi PG plastoglobule | RNAi |
| 2009 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2011 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2015 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2017 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2018 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2019 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2020 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2030 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2167 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp stroma | P3 trap-strepII |
| 2168 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp stroma | P3-strepII |
| 2184 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2185 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2193 | Detail | | | | | | | | [A. thaliana] | total soluble | P3-strepII 26 |
| 2209 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 Trapst 10 |
| 2210 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 strepII st28 |
| 2211 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 Trapst 12 |
| 2214 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 st |
| 2215 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 trap st |
| 2216 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 st |
| 2217 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 trap st |
| 2218 | Detail | | | | | | | | Total soluble [A. thaliana] | Total soluble proteins | cGEP strep |
| 2221 | Detail | | | | | | | | Total soluble [A. thaliana] | Total soluble proteins | cGEP strep |
| 2222 | Detail | | | | | | | | Total soluble [A. thaliana] | Total soluble proteins | cGEP strep |
| 2223 | Detail | | | | | | | | Total soluble [A. thaliana] | Total soluble proteins | cGEP strep |
| 2224 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P3 strep |
| 2225 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P3 trap |
| 2226 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2245 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2246 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2247 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2248 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2249 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2250 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2251 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2252 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2253 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2266 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp | Clp C1 wild-type |
| 2268 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2270 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2272 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2286 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2287 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2288 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2298 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2300 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2302 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2303 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2304 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2307 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2311 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2312 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2314 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2315 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2316 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2318 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
| 2325 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | abc1k6 |
| 2398 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/35SRecA-GFP |
| 2399 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1WTSTREP |
| 2400 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1TRAPSTREP |