PPDB

PPDB	The Plant Proteome Database

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AT3G09740.1 syntaxin of plants 71

Lab Annot.

syntaxin 71 (SYP71)
Mapman: 31.4 cell.vesicle transport

Curated Location

plasma membrane

TAIR curated location: integral to membrane11115874

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45280.3 11 Arabidopsis thaliana 4E-125 267 66 82 0 (0) _
AT3G45280.1 11 Arabidopsis thaliana 4E-125 267 66 82 0 (0) _
AT3G61450.2 11 Arabidopsis thaliana 1E-114 272 65 81 0 (0) _
Os05g48020.1 7 Oryza sativa 2E-129 284 65 79 17 (17) _
Os09g19550.1 7 Oryza sativa 6E-79 262 55 70 0 (0) _
Os01g49150.1 7 Oryza sativa 3E-51 150 57 73 0 (0) _
GRMZM2G057251_P01 3.21 Zea mays 4E-134 269 69 83 5 (5) _
Zm00001eb295070_P001 agpv5 Zea mays 4E-134 269 69 83 0 (0) _
v1_GRMZM2G057251_P01 4a53 Zea mays 4E-134 269 69 83 4 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APG17(2) ApoLp-III(2) DivIC(2) DUF2203(2) DUF4559(1) DUF5089(1) DUF848(2) Latarc
TargetP:	Cytoplasm (Class 1 C0.053; M0.101; S0.078; _0.949)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	266 aa (-cTP 240)
Molecular Weight	29.98 kDA(-cTP )
PI	5.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
17660356(tonoplast (Brassica oleracea buds))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21826108(SYP trans-Golgi-filtered)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data