PPDB

PPDB	The Plant Proteome Database

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AT3G09620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH45)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G09620.2 11 Arabidopsis thaliana 0 989 100 100 0 (0) _
AT1G20920.6 11 Arabidopsis thaliana 0 962 79 84 0 (0) _
AT1G20920.4 11 Arabidopsis thaliana 0 962 79 84 0 (0) _
Os08g06344.2 7 Oryza sativa 0 909 66 75 1 (1) _
Os08g06344.3 7 Oryza sativa 0 909 66 75 1 (1) _
Os08g06344.1 7 Oryza sativa 0 909 66 75 1 (1) _
GRMZM2G030659_P01 3.21 Zea mays 0 911 65 75 1 (1) _
Zm00001eb415650_P001 agpv5 Zea mays 0 911 65 75 0 (0) _
v1_GRMZM2G030659_P01 4a53 Zea mays 0 911 65 75 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) Helicase_C(2) ResIII(2)
TargetP:	Cytoplasm (Class 3 C0.299; M0.053; S0.054; _0.841)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	989 aa (-cTP 952)
Molecular Weight	111.62 kDA(-cTP )
PI	5.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data