PPDB

PPDB	The Plant Proteome Database

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AT3G09580.1 FAD/NAD(P)-binding oxidoreductase family protein

Lab Annot.

amine oxidase family
Mapman: 16.1.4 secondary metabolism.isoprenoids.carotenoids

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G14220.1 11 Arabidopsis thaliana 1E-07 216 26 44 77 (64) _
AT5G14220.4 11 Arabidopsis thaliana 2E-07 172 27 46 0 (0) S
AT5G14220.2 11 Arabidopsis thaliana 3E-06 66 39 59 57 (48) _
Os07g43370.1 7 Oryza sativa 5E-147 466 52 66 22 (22) M
Os04g41260.1 7 Oryza sativa 1E-06 170 25 45 0 (0) C
Os04g41260.2 7 Oryza sativa 1E-06 77 35 57 0 (0) C
Zm00001eb328010_P001 agpv5 Zea mays 2E-145 417 54 68 8 (8) C
GRMZM2G140288_P03 3.21 Zea mays 5E-145 417 54 68 94 (40) _
v1_GRMZM2G140288_P03 4a53 Zea mays 5E-145 417 54 68 34 (34) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Amino_oxidase(1) DAO(1) FAD_binding_2(1) FAD_binding_3(1) FAD_oxidored(1) GIDA(1
TargetP:	Chloroplast (Class 5 C0.588; M0.557; S0.024; _0.072)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	477 aa (-cTP 443)
Molecular Weight	52.26 kDA(-cTP 48.38)
PI	7.03(-cTP 5.50)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1615	Detail								Natural Senescence leaf [A. thaliana]
1618	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48
1625	Detail								Rosettes [A. thaliana]		Wild-type
1627	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	Wild-type
1628	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	k1xk3
1675	Detail								Rosettes [A. thaliana]
1933	Detail								leaf [A. thaliana]	chloroplast	wild-type
1934	Detail								leaf [A. thaliana]	chloroplast	wild-type
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1937	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1983	Detail								leaf [A. thaliana]	plastid	wild-type
1984	Detail								leaf [A. thaliana]	plastid	wild-type
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1987	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
12766230(Total chloroplast envelope)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data