PPDB

The Plant Proteome Database

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AT3G09560.1   Lipin family protein

Lab Annot. Lipin protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G09560.4 11Arabidopsis thaliana09041001000 (0)M
AT3G09560.3 11Arabidopsis thaliana09041001001 (1)M
AT3G09560.2 11Arabidopsis thaliana09041001001 (1)M
Os11g40080.1 7Oryza sativa4E-15141457700 (0)_
Os05g38710.1 7Oryza sativa2E-11531359760 (0)_
Os05g38710.2 7Oryza sativa3E-6122551710 (0)_
GRMZM2G099481_P01 3.21Zea mays041465820 (0)_
Zm00001eb289800_P002 agpv5Zea mays041465820 (0)_
Zm00001eb289800_P001 agpv5Zea mays041465820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipin_mid(1) Lipin_N(1) LNS2(1)
TargetP: Mitochondria (Class 5 C0.024; M0.323; S0.247; _0.270)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 904 aa (-cTP 870)
Molecular Weight 101.00 kDA(-cTP )
PI 4.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help