PPDB

PPDB	The Plant Proteome Database

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AT3G09490.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

plastid stroma (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G02590.1 11 Arabidopsis thaliana 3E-75 329 44 59 3 (1) C
AT2G37400.1 11 Arabidopsis thaliana 8E-70 254 48 63 2 (2) C
AT3G53560.1 11 Arabidopsis thaliana 2E-60 196 47 70 203 (182) C
Os05g08930.1 7 Oryza sativa 1E-17 190 30 48 0 (0) C
GRMZM5G847615_P01 3.21 Zea mays 1E-18 204 28 47 16 (16) C
Zm00001eb282930_P002 agpv5 Zea mays 1E-18 204 28 47 0 (0) C
v1_GRMZM2G089075_P01 4a53 Zea mays 1E-18 204 28 47 13 (13) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) BTAD(2) ChAPs(2) COQ7(1) DUF1149(1) DUF4919(2) PIN_2(1) PknG_TPR(2) TP
TargetP:	Chloroplast (Class 4 C0.499; M0.189; S0.000; _0.101)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	334 aa (-cTP 298)
Molecular Weight	38.41 kDA(-cTP 34.26)
PI	9.49(-cTP 9.20)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data