PPDB

 The Plant Proteome Database

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AT3G09150.1   phytochromobilin:ferredoxin oxidoreductase%2C chloroplast / phytochromobilin synthase (HY2)
Lab Annot. phytochromobilin:ferredoxin oxidoreductase/ phytochromobilin synthase (HY2)
Mapman: 19.6* tetrapyrrole synthesis.phytochrome
Curated Location plastid stroma (Pubmed: 23198870 )

TAIR curated location: chloroplast11226195
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G09150.2 11Arabidopsis thaliana0329999970 (68)C
AT3G09150.4 11Arabidopsis thaliana027299990 (0)C
AT3G09150.3 11Arabidopsis thaliana02501001007 (5)_
Os01g72090.1 7Oryza sativa8E-11228055720 (0)_
Os01g72090.2 7Oryza sativa4E-6516056780 (0)S
GRMZM5G861678_P06 3.21Zea mays2E-10728053710 (0)M
Zm00001eb363080_P001 agpv5Zea mays3E-10731151670 (0)_
GRMZM5G861678_P07 3.21Zea mays9E-6920650670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Fe_bilin_red(1) RCC_reductase(2)
TargetP: Chloroplast (Class 2 C0.875; M0.014; S0.030; _0.203)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 327 aa (-cTP 282) (-lTP 223)
Molecular Weight 37.87 kDA(-cTP 32.75)(-lTP 26.10)
PI 8.23(-cTP 5.73)(-lTP 5.326)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1870Detail       Total leaf [A. thaliana] Stroma wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2039Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2041Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2055Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2056Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2057Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2058Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2059Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2060Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2061Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2062Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2063Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2064Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2065Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2066Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2067Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2068Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2069Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2070Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2071Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2072Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2074Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2075Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2079Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2081Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2082Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2085Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2141Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2142Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2143Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2144Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2148Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2152Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 19995723(chloroplast reference proteome)

Comparative Proteomics Data

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