PPDB

The Plant Proteome Database

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AT3G09070.1   LOW protein: UPF0503-like protein%2C putative (DUF740)

Lab Annot. unknown function (DUF740)
Mapman: 35.1.40 not assigned.no ontology.glycine rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01170.1 11Arabidopsis thaliana1E-17270456641 (1)C
AT2G38070.1 11Arabidopsis thaliana2E-12965248590 (0)C
AT5G58930.1 11Arabidopsis thaliana4E-1748428390 (0)C
Os05g37800.1 7Oryza sativa1E-7472235470 (0)C
Os01g63310.1 7Oryza sativa1E-6668934480 (0)_
GRMZM2G084899_P01 3.21Zea mays1E-6872832440 (0)_
Zm00001eb288720_P001 agpv5Zea mays1E-6872832440 (0)_
v1_GRMZM2G084899_P01 4a53Zea mays1E-6872832440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cactin_mid(1) DUF5717(2) DUF740(2)
TargetP: Chloroplast (Class 2 C0.887; M0.044; S0.004; _0.148)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 685 aa (-cTP 638)
Molecular Weight 75.44 kDA(-cTP 70.49)
PI 8.05(-cTP 8.20)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))

Comparative Proteomics Data


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