PPDB

PPDB	The Plant Proteome Database

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AT3G08960.1 ARM repeat superfamily protein

Lab Annot.

protein transporter
Mapman: 34 transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G08960.3 11 Arabidopsis thaliana 0 1010 100 100 0 (0) C
AT3G08960.2 11 Arabidopsis thaliana 0 1010 100 100 0 (0) C
AT1G26170.1 11 Arabidopsis thaliana 5E-14 125 35 60 12 (7) _
Os07g49260.1 7 Oryza sativa 0 1017 59 77 4 (4) _
Os03g18190.1 7 Oryza sativa 0 1036 50 69 0 (0) S
Zm00001eb111960_P005 agpv5 Zea mays 0 1016 59 76 0 (0) C
Zm00001eb111960_P004 agpv5 Zea mays 0 1016 59 76 0 (0) C
v1_GRMZM2G151905_P02 4a53 Zea mays 0 1016 59 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBN_N(1) Xpo1(2)
TargetP:	Chloroplast (Class 5 C0.429; M0.085; S0.082; _0.273)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1010 aa (-cTP 946)
Molecular Weight	113.97 kDA(-cTP 107.14)
PI	5.39(-cTP 5.45)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2289	Detail								[A. thaliana]		Clp C1 TRAP
2298	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2304	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data