PPDB

The Plant Proteome Database

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AT3G08950.1   electron transport SCO1/SenC family protein

Lab Annot. HOMOLOGUE OF THE COPPER CHAPERONE SCO1 (HCC1)
Mapman: 9.7 mitochondrial electron transport / ATP synthesis.cytochrome c oxidase
Curated Location mitochondria (Pubmed: 21041373 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G39740.1 11Arabidopsis thaliana1E-4620236610 (0)M
Os02g06480.2 7Oryza sativa1E-11621869840 (0)M
Os02g06480.1 7Oryza sativa1E-11621869840 (0)M
Os09g20430.1 7Oryza sativa9E-4623833560 (0)M
Zm00001eb232640_P001 agpv5Zea mays5E-12022470850 (0)M
GRMZM5G812923_P03 3.21Zea mays5E-12022470851 (1)M
Zm00001eb232640_P002 agpv5Zea mays9E-5211866800 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AhpC-TSA(1) SCO1-SenC(1) SIS(1) Thioredoxin_8(1)
TargetP: Mitochondria (Class 3 C0.413; M0.872; S0.003; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 334 aa (-cTP 260)
Molecular Weight 37.19 kDA(-cTP )
PI 7.11(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1615Detail       Natural Senescence leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help