PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G08910.1   DNAJ heat shock family protein

Lab Annot. J-domain protein DjB4 (type 2)
Mapman: 26.29* misc.DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01390.1 11Arabidopsis thaliana033680876 (5)_
AT2G20560.1 11Arabidopsis thaliana2E-16433667805 (5)_
AT4G28480.1 11Arabidopsis thaliana3E-155347667640 (8)_
Os05g48810.1 7Oryza sativa1E-15036063740 (0)_
Os02g20394.1 7Oryza sativa1E-14734966772 (2)_
Os01g13760.1 7Oryza sativa2E-13834961720 (0)_
v1_GRMZM2G137495_P01 4a53Zea mays1E-15834667762 (2)_
Zm00001eb240640_P001 agpv5Zea mays1E-15834667760 (0)_
GRMZM2G137495_P01 3.21Zea mays1E-15834667760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DnaJ(1) DnaJ_C(1) RPT(1)
TargetP: Cytoplasm (Class 2 C0.061; M0.211; S0.093; _0.910)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 323 aa (-cTP 297)
Molecular Weight 35.80 kDA(-cTP )
PI 9.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2286Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help