PPDB

 The Plant Proteome Database

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AT3G08770.1   lipid transfer protein 6
Lab Annot. LTP6 (Lipid transfer protein 6)
Mapman: 11.6 lipid metabolism.lipid transfer proteins etc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G08770.2 11Arabidopsis thaliana2E-7611110010047 (47)S
AT5G01870.1 11Arabidopsis thaliana6E-3711651682 (2)S
AT5G59320.1 11Arabidopsis thaliana5E-24111456529 (27)S
Os05g40010.1 7Oryza sativa2E-229641610 (0)S
Os01g60740.2 6Oryza sativa3E-219644593 (3)S
Os11g02369.1 7Oryza sativa6E-219942572 (2)S
v1_GRMZM2G126397_P01 4a53Zea mays2E-199443606 (6)S
GRMZM2G126397_P01 3.21Zea mays2E-199443605 (5)S
Zm00001eb149490_P001 agpv5Zea mays2E-199443600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CutC(1) LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 1 C0.034; M0.047; S0.920; _0.033)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 113 aa (-cTP 56)
Molecular Weight 11.88 kDA(-cTP )
PI 7.45(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1333Detail       leaf [A. thaliana] total tissue - Low-mass range wild-type
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1351Detail       leaf [A. thaliana] total tissue t1-t2
1352Detail       leaf [A. thaliana] total tissue Prep1_Prep2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1354Detail       leaf [A. thaliana] total tissue wild-type
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2193Detail        [A. thaliana] total soluble P3-strepII 26
2246Detail       seedlings [A. thaliana] total tissue gfs9
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

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