PPDB

The Plant Proteome Database

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AT3G08620.1   RNA-binding KH domain-containing protein

Lab Annot. RNA-binding KH domain-containing protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G08620.2 11Arabidopsis thaliana6E-1762381001000 (0)M
AT2G38610.1 11Arabidopsis thaliana2E-16528681895 (2)_
AT2G38610.2 11Arabidopsis thaliana2E-16528681895 (2)_
Os07g12490.1 7Oryza sativa2E-14028269830 (0)M
Os03g60110.1 7Oryza sativa2E-13728371850 (0)_
Os05g40290.1 7Oryza sativa4E-12328463760 (0)_
v1_GRMZM2G472052_P02 4a53Zea mays5E-143281718511 (11)M
GRMZM2G472052_P02 3.21Zea mays5E-14328171855 (5)M
Zm00001eb303680_P002 agpv5Zea mays5E-14328171850 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5686(1) KH_1(1) STAR_dimer(1)
TargetP: Mitochondria (Class 5 C0.219; M0.337; S0.007; _0.258)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 283 aa (-cTP 259)
Molecular Weight 31.50 kDA(-cTP )
PI 9.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help