PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G08610.1   NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: mitochondrion12837548,14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g40300.1 7Oryza sativa6E-306371880 (0)S
Os05g40300.2 7Oryza sativa6E-306371880 (0)S
GRMZM2G163468_P01 3.21Zea mays1E-316080935 (5)S
Zm00001eb290920_P001 agpv5Zea mays1E-153677910 (0)S

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MWFE(1)
TargetP: Secreted (Class 3 C0.045; M0.161; S0.706; _0.204)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 65 aa (-cTP 46)
Molecular Weight 7.34 kDA(-cTP )
PI 7.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1744Detail        [A. thaliana] Mep-6

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
12837548(mitochondria-complex_I)
18436743(specific to roots)
20197505(mitochondria Complex I (leaf))
21841088(mitochondria (2DE native gel))
21988472(vacuole (unfiltered data))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help