PPDB

The Plant Proteome Database

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AT3G08600.1   transmembrane protein%2C putative (DUF1191)

Lab Annot. unknown protein DUF538 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22900.1 11Arabidopsis thaliana6E-3934334510 (0)S
AT4G11950.1 11Arabidopsis thaliana1E-3231633500 (0)S
AT4G01140.1 11Arabidopsis thaliana2E-2828130510 (0)S
Os11g02630.1 7Oryza sativa9E-10032249660 (0)S
Os12g02550.1 7Oryza sativa9E-10032249660 (0)S
Os04g49140.1 7Oryza sativa3E-1211834530 (0)M
Zm00001eb093870_P001 agpv5Zea mays2E-7329747640 (0)S
v1_GRMZM2G304212_P01 4a53Zea mays2E-7329747642 (2)S
GRMZM2G304212_P01 3.21Zea mays2E-7329747640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1191(1) EphA2_TM(1) Gypsy(1) LRR19-TM(1) Pox_A14(1) Syndecan(1) TMEM51(1) TNF
TargetP: Mitochondria (Class 5 C0.008; M0.428; S0.362; _0.002)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 316 aa (-cTP 243)
Molecular Weight 34.73 kDA(-cTP )
PI 9.58(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19106119(plasma membrane detergent resistent microdomains (DRM))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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