PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G08600.1 transmembrane protein%2C putative (DUF1191)

Lab Annot.

unknown protein DUF538 domain
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G22900.1 11 Arabidopsis thaliana 6E-39 343 34 51 0 (0) S
AT4G11950.1 11 Arabidopsis thaliana 1E-32 316 33 50 0 (0) S
AT4G01140.1 11 Arabidopsis thaliana 2E-28 281 30 51 0 (0) S
Os11g02630.1 7 Oryza sativa 9E-100 322 49 66 0 (0) S
Os12g02550.1 7 Oryza sativa 9E-100 322 49 66 0 (0) S
Os04g49140.1 7 Oryza sativa 3E-12 118 34 53 0 (0) M
Zm00001eb093870_P001 agpv5 Zea mays 2E-73 297 47 64 0 (0) S
v1_GRMZM2G304212_P01 4a53 Zea mays 2E-73 297 47 64 2 (2) S
GRMZM2G304212_P01 3.21 Zea mays 2E-73 297 47 64 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1191(1) EphA2_TM(1) Gypsy(1) LRR19-TM(1) Pox_A14(1) Syndecan(1) TMEM51(1) TNF
TargetP:	Mitochondria (Class 5 C0.008; M0.428; S0.362; _0.002)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	316 aa (-cTP 243)
Molecular Weight	34.73 kDA(-cTP )
PI	9.58(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19106119(plasma membrane detergent resistent microdomains (DRM))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data