|
AT3G08010.1
RNA binding protein
|
| Lab Annot. |
ATAB2 - RNA binding protein; activator translation (affects both photosystems)
Mapman: 27.4 RNA.RNA binding |
| Curated Location |
plastid stroma (Pubmed: 23198870 17139246 18431481 )
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
Tab2_like(1) |
| TargetP: |
Chloroplast (Class 4 C0.883; M0.517; S0.002; _0.023) |
| Predotar: |
|
| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
374 aa (-cTP 310) |
| Molecular Weight |
41.92 kDA(-cTP 34.62) |
| PI |
5.01(-cTP 4.52) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 1348 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 1) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1396 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpt1xclpt2 (rep. 2) |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1415 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 rep 1.1 | clpr2-1 |
| 1416 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 rep 1.2 | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1421 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1426 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 3) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1455 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 1) |
| 1456 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 2) |
| 1457 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1696 | Detail | | | | | | | | Rosettes [A. thaliana] | Thylakoids thylakoid membrane | k1k3 |
| 1745 | Detail | | | | | | | | [A. thaliana] | | Col-0 |
| 1765 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 |
| 1830 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 Normal light |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1947 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2011 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2017 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2018 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2020 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2310 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2311 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2317 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2318 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2319 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2321 | Detail | | | | | | | | leaf [A. thaliana] | | |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
| 2325 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | abc1k6 |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
21515685(GreenCut2)
|
|
Comparative Proteomics Data
|
|
