PPDB

 The Plant Proteome Database

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AT3G08000.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23830.1 11Arabidopsis thaliana3E-258158717 (1)M
AT3G23830.2 11Arabidopsis thaliana3E-258158717 (1)M
AT4G13850.4 11Arabidopsis thaliana2E-24815475125 (96)M
Os01g68524.2 7Oryza sativa4E-459673820 (0)M
Os01g68790.2 7Oryza sativa9E-2981627921 (21)C
Os01g68790.3 7Oryza sativa9E-2981627910 (10)C
v1_GRMZM2G470862_P01 4a53Zea mays8E-4412061740 (0)M
GRMZM2G470862_P01 3.21Zea mays8E-4412061741 (0)M
Zm00001eb364970_P002 agpv5Zea mays8E-4412061740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: RRM_1(1) RRM_7(1)
TargetP: Chloroplast (Class 3 C0.627; M0.134; S0.034; _0.047)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 143 aa (-cTP 109)
Molecular Weight 15.61 kDA(-cTP 11.77)
PI 9.83(-cTP 9.69)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help