PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G07930.1   DNA glycosylase superfamily protein
Lab Annot. DNA glycosylase protein
Mapman: 28.2 DNA.repair
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07930.3 11Arabidopsis thaliana034199990 (0)_
AT3G07930.2 11Arabidopsis thaliana035898980 (0)_
AT3G07930.4 11Arabidopsis thaliana8E-13319297980 (0)_
Os09g01290.1 7Oryza sativa5E-108246580 (0)_
Os09g01290.2 7Oryza sativa5E-108246580 (0)_
v1_GRMZM2G319402_P02 4a53Zea mays8E-108941560 (0)C
GRMZM2G319402_P02 3.21Zea mays8E-108941560 (0)C
Zm00001eb264110_P001 agpv5Zea mays1E-088643580 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.048; M0.331; S0.059; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 352 aa (-cTP 328)
Molecular Weight 40.26 kDA(-cTP )
PI 8.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help