PPDB

PPDB	The Plant Proteome Database

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AT3G07780.1 potyvirus VPg interacting protein (DUF1423)

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G07780.3 11 Arabidopsis thaliana 0 566 100 100 0 (0) C
AT3G07780.2 11 Arabidopsis thaliana 0 566 100 100 0 (0) M
AT5G48160.1 11 Arabidopsis thaliana 0 582 76 86 0 (0) C
Os12g32980.1 7 Oryza sativa 0 619 54 69 0 (0) C
Os11g41880.1 7 Oryza sativa 1E-92 367 42 63 0 (0) M
Os03g13590.1 7 Oryza sativa 7E-91 441 37 57 0 (0) _
v1_GRMZM2G168476_P01 4a53 Zea mays 0 604 51 68 1 (1) C
Zm00001eb115250_P001 agpv5 Zea mays 0 604 51 68 0 (0) C
GRMZM2G168476_P01 3.21 Zea mays 0 604 51 68 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Imm27(2) Oberon_cc(1) PHD(1) PHD_Oberon(1)
TargetP:	Chloroplast (Class 3 C0.817; M0.367; S0.011; _0.030)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	566 aa (-cTP 524)
Molecular Weight	64.16 kDA(-cTP 59.67)
PI	6.71(-cTP 6.36)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data