PPDB

The Plant Proteome Database

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AT3G07750.1   3'-5'-exoribonuclease family protein

Lab Annot. 3'-5'-exoribonuclease protein
Mapman: 27.1.19 RNA.processing.ribonucleases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07750.2 11Arabidopsis thaliana02861001001 (1)_
AT3G12990.4 11Arabidopsis thaliana5E-2626429500 (0)_
AT3G12990.1 11Arabidopsis thaliana9E-2626529500 (0)_
Os12g21500.1 7Oryza sativa2E-15928375873 (3)_
Os02g34570.1 7Oryza sativa2E-2828129520 (0)_
Os02g34570.2 7Oryza sativa2E-2828129520 (0)_
v1_GRMZM2G116133_P01 4a53Zea mays4E-15927476896 (6)_
GRMZM2G116133_P07 3.21Zea mays4E-15927476891 (1)_
GRMZM2G116133_P06 3.21Zea mays4E-15927476891 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNase_PH(2) RNase_PH_C(1)
TargetP: Cytoplasm (Class 4 C0.179; M0.238; S0.027; _0.554)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 286 aa (-cTP 205)
Molecular Weight 29.96 kDA(-cTP )
PI 4.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help