PPDB

 The Plant Proteome Database

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AT3G07670.1   Rubisco methyltransferase family protein
Lab Annot. SET domain-containing protein
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07670.2 11Arabidopsis thaliana03661001000 (0)_
AT5G14260.4 11Arabidopsis thaliana5E-3035030470 (0)C
AT5G14260.2 11Arabidopsis thaliana9E-303503047449 (308)C
Os02g49326.1 7Oryza sativa0444748510 (10)M
Os09g24530.1 7Oryza sativa4E-35397285112 (12)C
Os12g13460.1 7Oryza sativa2E-28428284426 (26)C
Zm00001eb189210_P003 agpv5Zea mays044973850 (0)C
v1_GRMZM2G077258_P03 4a53Zea mays0449738518 (18)C
GRMZM2G077258_P03 3.21Zea mays0449738543 (25)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Rubis-subs-bind(1) SET(1)
TargetP: Mitochondria (Class 4 C0.415; M0.675; S0.043; _0.017)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 504 aa (-cTP 450)
Molecular Weight 57.61 kDA(-cTP )
PI 8.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2311Detail       leaf [A. thaliana] PG plastoglobule 
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help