PPDB

 The Plant Proteome Database

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AT3G07630.1   arogenate dehydratase 2
Lab Annot. ADT2 (AROGENATE DEHYDRATASE 2); arogenate dehydratase
Mapman: 13.1.6.3.1 amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase
Curated Location plastid stroma (Pubmed: 23198870 19136569 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07630.3 11Arabidopsis thaliana03811001000 (0)C
AT3G07630.2 11Arabidopsis thaliana038110010060 (17)C
AT1G11790.1 11Arabidopsis thaliana2E-144355587340 (7)M
Os07g49390.1 7Oryza sativa5E-156306728310 (10)C
Os03g17730.1 7Oryza sativa4E-15130471822 (2)C
Os04g33390.1 7Oryza sativa6E-13730863780 (0)C
v1_GRMZM2G141273_P02 4a53Zea mays6E-153307718219 (19)C
GRMZM2G141273_P04 3.21Zea mays6E-153307718265 (21)C
GRMZM2G141273_P03 3.21Zea mays6E-153307718265 (21)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ACT(2) PDT(1)
TargetP: Chloroplast (Class 4 C0.669; M0.270; S0.003; _0.119)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 381 aa (-cTP 315)
Molecular Weight 42.11 kDA(-cTP 34.93)
PI 7.67(-cTP 5.82)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1176Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1294Detail       leaf [A. thaliana] co-IP cGEP (rep. 2) stromawild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help