PPDB

 The Plant Proteome Database

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AT3G07460.1   transmembrane protein%2C putative (Protein of unknown function%2C DUF538)
Lab Annot. unknown protein DUF1191 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07460.2 11Arabidopsis thaliana2E-10815410010024 (16)S
AT3G07470.1 11Arabidopsis thaliana9E-89177728084 (67)S
AT3G07470.3 11Arabidopsis thaliana2E-8214879870 (0)S
Os01g68500.1 7Oryza sativa3E-3811252703 (3)S
Os07g36410.1 7Oryza sativa1E-26118416116 (16)S
Os05g13420.2 7Oryza sativa8E-1811931520 (0)S
Zm00001eb143640_P001 agpv5Zea mays1E-3311345660 (0)S
v1_GRMZM2G403371_P01 4a53Zea mays1E-3311345664 (4)S
v1_GRMZM2G403371_P02 4a53Zea mays2E-3311345664 (4)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF538(1)
TargetP: Secreted (Class 1 C0.008; M0.018; S0.991; _0.041)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 177 aa (-cTP 156)
Molecular Weight 19.44 kDA(-cTP )
PI 4.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1596Detail        [A. thaliana]  
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2251Detail       seedlings [A. thaliana] total tissue wild-type
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15539469(vacuole)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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