PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G07340.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07340.2 11Arabidopsis thaliana041799990 (0)C
AT5G48560.1 11Arabidopsis thaliana6E-14452055620 (0)_
AT5G48560.2 11Arabidopsis thaliana3E-13347956630 (0)_
Os01g68700.2 7Oryza sativa2E-6848438500 (0)_
Os01g68700.1 7Oryza sativa8E-6846038500 (0)_
Os09g32510.4 7Oryza sativa4E-5824550580 (0)S
Zm00001eb143520_P002 agpv5Zea mays1E-5947636460 (0)_
v1_GRMZM2G180406_P02 4a53Zea mays1E-5947636460 (0)_
v1_GRMZM2G180406_P01 4a53Zea mays1E-5947636460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(2)
TargetP: Chloroplast (Class 3 C0.767; M0.051; S0.009; _0.269)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 456 aa (-cTP 396)
Molecular Weight 50.25 kDA(-cTP 43.57)
PI 6.25(-cTP 6.86)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help