PPDB

The Plant Proteome Database

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AT3G07320.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23770.1 11Arabidopsis thaliana044554730 (0)S
AT4G14080.1 11Arabidopsis thaliana2E-17647750690 (0)S
AT4G26830.1 11Arabidopsis thaliana9E-11746239590 (0)S
Os09g32550.1 7Oryza sativa5E-15944750690 (0)S
Os09g32550.2 7Oryza sativa5E-15944750690 (0)S
Os08g41410.1 7Oryza sativa8E-14544448680 (0)S
v1_GRMZM2G458164_P01 4a53Zea mays2E-16544552685 (5)S
GRMZM2G458164_P01 3.21Zea mays2E-16544552681 (1)S
Zm00001eb317500_P001 agpv5Zea mays2E-16544552680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1) X8(1)
TargetP: Secreted (Class 4 C0.059; M0.145; S0.482; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 460 aa (-cTP 412)
Molecular Weight 50.60 kDA(-cTP )
PI 8.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

17526915(glycoproteome cell wall (stems))
19546170(mature pollen grains)
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help