PPDB

PPDB	The Plant Proteome Database

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AT3G07120.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13100.5 11 Arabidopsis thaliana 3E-24 110 47 60 0 (0) _
AT4G13100.3 11 Arabidopsis thaliana 3E-24 110 47 60 0 (0) _
AT4G13100.1 11 Arabidopsis thaliana 3E-24 110 47 60 0 (0) _
Os01g68900.1 7 Oryza sativa 3E-18 124 37 50 0 (0) _
Os09g32730.1 7 Oryza sativa 9E-15 102 34 52 0 (0) M
Os08g41520.1 7 Oryza sativa 1E-14 47 55 82 0 (0) M
Zm00001eb364690_P001 agpv5 Zea mays 4E-21 110 40 57 0 (0) _
GRMZM2G082376_P01 3.21 Zea mays 4E-21 110 40 57 0 (0) _
v1_GRMZM2G082376_P01 4a53 Zea mays 4E-21 110 40 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3246(1) MscS_TM(1) Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-
TargetP:	Cytoplasm (Class 5 C0.131; M0.183; S0.101; _0.293)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	360 aa (-cTP 353)
Molecular Weight	39.45 kDA(-cTP )
PI	4.74(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data