PPDB

The Plant Proteome Database

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AT3G07090.1   PPPDE putative thiol peptidase family protein

Lab Annot. PPPDE putative thiol peptidase; deSUMOylation/deubiquination
Mapman: 29.5.3.5.1* protein.degradation.cysteine protease.CP.C97
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07090.2 11Arabidopsis thaliana02651001000 (0)_
AT5G25170.1 11Arabidopsis thaliana3E-1212931540 (0)M
AT2G25190.1 11Arabidopsis thaliana6E-1212733510 (0)M
Os02g56900.1 7Oryza sativa5E-11026060731 (1)_
Os10g33350.2 6Oryza sativa4E-9827950690 (0)_
Os10g33350.1 7Oryza sativa4E-9827950690 (0)M
v1_GRMZM2G078887_P01 4a53Zea mays8E-10926458730 (0)_
Zm00001eb258670_P001 agpv5Zea mays8E-10926458730 (0)_
GRMZM2G078887_P01 3.21Zea mays8E-10926458732 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_C97(1)
TargetP: Cytoplasm (Class 3 C0.043; M0.137; S0.250; _0.763)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 265 aa (-cTP 262)
Molecular Weight 28.85 kDA(-cTP )
PI 5.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help