PPDB

PPDB	The Plant Proteome Database

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AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G06920.3 11 Arabidopsis thaliana 0 862 100 100 0 (0) _
AT3G06920.2 11 Arabidopsis thaliana 0 862 100 100 0 (0) _
AT4G31850.1 11 Arabidopsis thaliana 2E-108 790 30 48 10 (8) C
Os07g14530.3 7 Oryza sativa 0 838 62 78 0 (0) C
Os07g14530.2 7 Oryza sativa 0 838 62 78 0 (0) C
Os07g14530.1 7 Oryza sativa 0 838 62 78 0 (0) C
v1_GRMZM2G086757_P01 4a53 Zea mays 0 376 72 86 0 (0) _
Zm00001eb304410_P004 agpv5 Zea mays 0 803 62 79 0 (0) M
Zm00001eb304410_P003 agpv5 Zea mays 0 803 62 79 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(5) ATP13(3) BTAD(3) Clathrin(5) DUF1611(2) DUF2095(3) DUF3368(2) MNE1(2)
TargetP:	Cytoplasm (Class 2 C0.042; M0.189; S0.087; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	871 aa (-cTP 869)
Molecular Weight	98.34 kDA(-cTP )
PI	6.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)

Comparative Proteomics Data