PPDB

The Plant Proteome Database

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AT3G06890.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g22360.1 7Oryza sativa6E-139662780 (0)_
Os07g47660.1 7Oryza sativa8E-108850700 (0)_
v1_GRMZM2G322917_P01 4a53Zea mays4E-1611361760 (0)_
GRMZM2G322917_P01 3.21Zea mays4E-1611361760 (0)_
Zm00001eb016470_P001 agpv5Zea mays4E-1611361760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CbiN(3) DUF347(2) DUF5518(2) SBF_like(1) SLAC1(1)
TargetP: Cytoplasm (Class 3 C0.022; M0.420; S0.020; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 128 aa (-cTP 101)
Molecular Weight 13.26 kDA(-cTP )
PI 4.31(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help