PPDB

 The Plant Proteome Database

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AT3G06850.1   2-oxoacid dehydrogenases acyltransferase family protein
Lab Annot. DIN3/LTA1 (DARK INDUCIBLE 3); alpha-ketoacid dehydrogenase
Mapman: 13.2.4.1 amino acid metabolism.degradation.branched-chain group.shared
Curated Location mitochondria (Pubmed: 14764908 20018591 )

TAIR curated location: mitochondrion10933498,14671022,14764908
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G06850.2 11Arabidopsis thaliana048310010059 (45)C
AT1G54220.1 11Arabidopsis thaliana3E-39441284660 (8)M
AT1G54220.2 11Arabidopsis thaliana3E-39441284659 (7)M
Os01g21160.2 7Oryza sativa045162755 (5)M
Os01g21160.1 7Oryza sativa044663755 (5)M
Os01g21160.4 7Oryza sativa8E-12733560720 (0)M
Zm00001eb130640_P002 agpv5Zea mays045060730 (0)M
GRMZM2G033644_P01 3.21Zea mays04506073109 (41)M
v1_GRMZM2G043762_P01 4a53Zea mays0450607344 (44)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2-oxoacid_dh(1) Biotin_lipoyl(1) Biotin_lipoyl_2(2) E3_binding(2)
TargetP: Chloroplast (Class 5 C0.822; M0.630; S0.003; _0.004)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 483 aa (-cTP 403)
Molecular Weight 52.71 kDA(-cTP 43.74)
PI 6.29(-cTP 5.59)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1508Detail        [A. thaliana]  
1744Detail        [A. thaliana] Mep-6
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2209Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 10
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2269Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
14764908(mitochondria-suspension cells)
19525416(leaf (wt and clpr4-1 mutant))
20601493(mitochondria (diurnal change))
20018591(Zn2+ binding (mitochondria - cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

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