PPDB

PPDB	The Plant Proteome Database

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AT3G06720.1 importin alpha isoform 1

Lab Annot.

importin alpha-1 subunit, putative (IMPA1)
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

nucleus (Pubmed: 10428841 )

TAIR curated location: nuclear envelope10428841

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G06720.2 11 Arabidopsis thaliana 0 532 100 100 97 (26) _
AT4G16143.1 11 Arabidopsis thaliana 0 537 84 90 336 (118) _
AT4G16143.2 11 Arabidopsis thaliana 0 537 84 90 319 (101) _
Os05g06350.1 7 Oryza sativa 0 537 78 87 28 (28) _
Os01g14950.1 7 Oryza sativa 0 518 79 88 40 (40) _
Os01g24060.2 7 Oryza sativa 0 526 64 80 0 (0) _
GRMZM2G091119_P01 3.21 Zea mays 0 500 82 90 70 (26) _
v1_GRMZM2G091119_P01 4a53 Zea mays 0 500 82 90 30 (30) _
Zm00001eb127630_P001 agpv5 Zea mays 0 500 82 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_N(2) Arm(8) Arm_2(4) Arm_3(1) Asp_Glu_race(1) Atx10homo_assoc(2) Cnd1(3)
TargetP:	Cytoplasm (Class 4 C0.115; M0.343; S0.013; _0.629)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	532 aa (-cTP 511)
Molecular Weight	58.64 kDA(-cTP )
PI	5.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2296	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

16287169(Cell Wall proteome)
15496452(nucleolus)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data