PPDB

The Plant Proteome Database

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AT3G06610.1   DNA-binding enhancer protein-like protein

Lab Annot. DNA-binding enhancer protein-related
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g61680.1 7Oryza sativa4E-529882914 (4)S
Zm00001eb211320_P001 agpv5Zea mays4E-509781900 (0)_
GRMZM2G138523_P01 3.21Zea mays4E-5097819013 (12)_
Zm00001eb211320_P002 agpv5Zea mays7E-479781870 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HYPK_UBA(1) ORC6(1) PDEase_I(1) VIT_2(1)
TargetP: Cytoplasm (Class 3 C0.284; M0.075; S0.024; _0.856)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 115 aa (-cTP 65)
Molecular Weight 12.80 kDA(-cTP )
PI 4.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1427Detail        [A. thaliana] total leaf tissue 1.11 wild-type
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2247Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
18445580(leaves)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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