PPDB

The Plant Proteome Database

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AT3G06590.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G06590.4 11Arabidopsis thaliana6E-1562211001000 (0)C
AT3G06590.3 11Arabidopsis thaliana6E-1562211001000 (0)C
AT3G06590.2 11Arabidopsis thaliana6E-1562211001000 (0)C
Os03g19780.1 7Oryza sativa2E-2816749610 (0)_
Os01g14110.1 7Oryza sativa4E-1817336530 (0)M
Os07g48900.1 7Oryza sativa2E-1715843540 (0)C
GRMZM5G851485_P01 3.21Zea mays3E-2816945630 (0)_
GRMZM2G112428_P01 3.21Zea mays2E-2616744610 (0)_
Zm00001eb014980_P001 agpv5Zea mays7E-2316938550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FTZ(1) HLH(2)
TargetP: Chloroplast (Class 2 C0.973; M0.005; S0.004; _0.299)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 221 aa (-cTP 185) (-lTP 123)
Molecular Weight 24.26 kDA(-cTP 20.51)(-lTP 13.75)
PI 11.83(-cTP 11.87)(-lTP 11.960)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


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