PPDB

The Plant Proteome Database

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AT3G06483.1   pyruvate dehydrogenase kinase

Lab Annot. pyruvate dehydrogenase (lipoamide) kinase (pdhk)
Mapman: 18 Co-factor and vitamine metabolism
Curated Location mitochondria
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os07g44330.2 7Oryza sativa036673850 (0)_
Os07g44330.1 7Oryza sativa037671820 (0)_
Os03g25400.1 7Oryza sativa035072840 (0)M
v1_GRMZM2G107196_P03 4a53Zea mays036671840 (0)M
Zm00001eb018000_P001 agpv5Zea mays036671840 (0)M
Zm00001eb018000_P003 agpv5Zea mays036671840 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BCDHK_Adom3(1) HATPase_c(1) HATPase_c_3(1)
TargetP: Cytoplasm (Class 3 C0.092; M0.182; S0.108; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 366 aa (-cTP 334)
Molecular Weight 41.45 kDA(-cTP )
PI 6.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2296Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help