PPDB

PPDB	The Plant Proteome Database

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AT3G06455.1 ubiquitin family protein

Lab Annot.

Mapman: 27.1.1 RNA.processing.splicing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01000.2 11 Arabidopsis thaliana 1E-137 408 61 67 0 (0) _
AT4G01000.1 11 Arabidopsis thaliana 1E-137 408 61 67 0 (0) _
Os01g48930.1 7 Oryza sativa 3E-43 448 31 43 0 (0) _
Os01g48930.2 7 Oryza sativa 5E-42 375 33 49 0 (0) _
Os03g50850.2 7 Oryza sativa 2E-07 55 49 69 0 (0) _
v1_GRMZM2G150160_P01 4a53 Zea mays 7E-23 62 74 91 0 (0) M
Zm00001eb156640_P002 agpv5 Zea mays 7E-23 62 74 91 0 (0) M
GRMZM2G150160_P01 3.21 Zea mays 7E-23 62 74 91 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Sde2_N_Ubi(1) Telomere_Sde2_2(2) ubiquitin(1)
TargetP:	Cytoplasm (Class 5 C0.032; M0.113; S0.185; _0.314)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	345 aa (-cTP 284)
Molecular Weight	37.73 kDA(-cTP )
PI	8.67(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data