PPDB

The Plant Proteome Database

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AT3G06420.1   Ubiquitin-like superfamily protein

Lab Annot. ATG8h - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15580.1 11Arabidopsis thaliana1E-5611567840 (0)_
AT4G21980.1 11Arabidopsis thaliana5E-4211355731 (1)_
AT4G21980.2 11Arabidopsis thaliana1E-4111355731 (1)C
Os11g01010.1 7Oryza sativa5E-4911561800 (0)_
Os08g09240.2 7Oryza sativa1E-4111354730 (0)_
Os08g09240.1 7Oryza sativa1E-4111354730 (0)_
Zm00001eb431210_P004 agpv5Zea mays4E-4211355740 (0)_
Zm00001eb431210_P002 agpv5Zea mays4E-4211355740 (0)_
Zm00001eb431210_P003 agpv5Zea mays4E-4211355740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) APG5(1) Atg8(1)
TargetP: Cytoplasm (Class 2 C0.039; M0.131; S0.131; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 119 aa (-cTP 115)
Molecular Weight 13.88 kDA(-cTP )
PI 6.83(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help