PPDB

PPDB	The Plant Proteome Database

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AT3G06400.3 chromatin-remodeling protein 11

Lab Annot.

chromatin-remodeling protein 11
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

PeptideAtlas POGS Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G06400.1 11 Arabidopsis thaliana 0 1057 99 99 11 (11) _
AT3G06400.2 11 Arabidopsis thaliana 0 1058 99 99 11 (11) _
AT5G18620.2 11 Arabidopsis thaliana 0 1065 91 95 3 (3) _
Os01g27040.1 7 Oryza sativa 0 1010 85 93 4 (4) _
ChrUn.fgenesh.mRNA.85 7 Oryza sativa 0 1024 83 91 0 (0)
Os05g05780.1 7 Oryza sativa 0 1025 83 91 0 (0) _
AC235535.1_FGP001 3.21 Zea mays 0 936 85 91 16 (5) _
v1_AC235535.1_FGP001 4a53 Zea mays 0 936 85 91 21 (21) _
Zm00001eb341650_P001 agpv5 Zea mays 0 891 84 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DBINO(2) DEAD(1) DUF1086(1) HAND(2) HDA2-3(1) Helicase_C(1) Myb_DNA-binding(2) O
TargetP:	Cytoplasm (Class 2 C0.177; M0.103; S0.150; _0.869)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1057 aa (-cTP 1036)
Molecular Weight	122.61 kDA(-cTP )
PI	5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1535	Detail								leaf [A. thaliana]		wild-type
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data