PPDB

The Plant Proteome Database

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AT3G06390.1   Uncharacterized protein family (UPF0497)

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15610.1 11Arabidopsis thaliana9E-5215851701 (1)_
AT4G15610.2 11Arabidopsis thaliana3E-339556760 (0)_
AT5G15290.1 11Arabidopsis thaliana1E-1917032510 (0)_
Os07g26110.1 7Oryza sativa2E-4016944630 (0)_
Os12g41690.1 7Oryza sativa2E-1514834550 (0)_
Os06g12500.1 7Oryza sativa6E-1516633540 (0)_
Zm00001eb094710_P001 agpv5Zea mays3E-4016946630 (0)C
v1_GRMZM2G132128_P01 4a53Zea mays3E-4016946630 (0)C
GRMZM5G863076_P02 3.21Zea mays3E-4016946630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Arv1(1) DUF588(1)
TargetP: Cytoplasm (Class 4 C0.395; M0.017; S0.101; _0.788)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 199 aa (-cTP 123)
Molecular Weight 21.16 kDA(-cTP )
PI 4.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help