PPDB

PPDB	The Plant Proteome Database

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AT3G06330.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G06330.3 11 Arabidopsis thaliana 0 360 98 99 0 (0) C
AT3G06330.4 11 Arabidopsis thaliana 0 315 100 100 0 (0) C
AT3G06330.2 11 Arabidopsis thaliana 0 257 100 100 0 (0) _
Os06g46366.1 7 Oryza sativa 3E-78 415 37 56 0 (0) _
Os02g06920.2 7 Oryza sativa 5E-75 431 36 52 0 (0) C
Os02g06920.1 7 Oryza sativa 5E-75 431 36 52 0 (0) C
Zm00001eb224730_P001 agpv5 Zea mays 5E-77 441 35 54 0 (0) _
GRMZM2G000753_P01 3.21 Zea mays 5E-77 441 35 54 0 (0) _
v1_GRMZM2G000753_P01 4a53 Zea mays 5E-77 441 35 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Auxin_repressed(1) DUF4796(1) RINGv(1) zf-RING-like(1) zf-RING_2(1)
TargetP:	Chloroplast (Class 4 C0.697; M0.019; S0.008; _0.418)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	4 TMs
Aramemnon:	4 TMs
TAT position:
Length	426 aa (-cTP 422)
Molecular Weight	46.71 kDA(-cTP 46.19)
PI	8.76(-cTP 8.66)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data