PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G06300.1   P4H isoform 2

Lab Annot. AT-P4H-2 (A. THALIANA P4H ISOFORM 2); oxidoreductase
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18900.1 11Arabidopsis thaliana029883921 (1)S
AT3G28480.1 11Arabidopsis thaliana9E-12127360740 (0)S
AT3G28490.1 11Arabidopsis thaliana8E-11426860750 (0)S
Os05g41010.1 7Oryza sativa4E-13527164800 (0)S
Os03g58890.2 7Oryza sativa1E-12027061770 (0)S
Os03g58880.1 7Oryza sativa3E-11931255690 (0)S
Zm00001eb291180_P004 agpv5Zea mays2E-13130260750 (0)S
GRMZM2G459063_P02 3.21Zea mays2E-13130260750 (0)S
v1_GRMZM2G459063_P02 4a53Zea mays2E-13130260750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) 2OG-FeII_Oxy_3(1) ShK(1)
TargetP: Secreted (Class 1 C0.030; M0.025; S0.934; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 299 aa (-cTP 253)
Molecular Weight 33.02 kDA(-cTP )
PI 5.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help