PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein

Lab Annot.

Serinc-domain containing serine and sphingolipid biosynthesis protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G16180.2 11 Arabidopsis thaliana 4E-175 393 64 79 0 (0) S
AT1G16180.1 11 Arabidopsis thaliana 4E-175 393 64 79 0 (0) S
AT3G24460.1 11 Arabidopsis thaliana 7E-59 381 31 50 0 (0) _
Os03g34300.1 7 Oryza sativa 0 414 71 85 0 (0) S
Os03g34300.2 7 Oryza sativa 0 411 64 77 0 (0) S
Os02g54990.2 7 Oryza sativa 5E-173 392 64 77 0 (0) S
v1_GRMZM2G024145_P03 4a53 Zea mays 0 343 74 88 0 (0) _
Zm00001eb043310_P001 agpv5 Zea mays 0 338 74 88 0 (0) S
GRMZM2G024145_P02 3.21 Zea mays 0 411 71 86 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2207(3) Serinc(1)
TargetP:	Secreted (Class 5 C0.441; M0.170; S0.484; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction:	8 TMs
Aramemnon:	10 TMs
TAT position:
Length	409 aa (-cTP 371)
Molecular Weight	44.88 kDA(-cTP )
PI	6.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
21988472(vacuole (unfiltered data))
21515685(GreenCut2)

Comparative Proteomics Data