PPDB

The Plant Proteome Database

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AT3G06170.1   Serinc-domain containing serine and sphingolipid biosynthesis protein

Lab Annot. Serinc-domain containing serine and sphingolipid biosynthesis protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16180.2 11Arabidopsis thaliana4E-17539364790 (0)S
AT1G16180.1 11Arabidopsis thaliana4E-17539364790 (0)S
AT3G24460.1 11Arabidopsis thaliana7E-5938131500 (0)_
Os03g34300.1 7Oryza sativa041471850 (0)S
Os03g34300.2 7Oryza sativa041164770 (0)S
Os02g54990.2 7Oryza sativa5E-17339264770 (0)S
v1_GRMZM2G024145_P03 4a53Zea mays034374880 (0)_
Zm00001eb043310_P001 agpv5Zea mays033874880 (0)S
GRMZM2G024145_P02 3.21Zea mays041171860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2207(3) Serinc(1)
TargetP: Secreted (Class 5 C0.441; M0.170; S0.484; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 10 TMs
TAT position:
Length 409 aa (-cTP 371)
Molecular Weight 44.88 kDA(-cTP )
PI 6.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
21988472(vacuole (unfiltered data))
21515685(GreenCut2)

Comparative Proteomics Data


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