PPDB

PPDB	The Plant Proteome Database

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AT3G06140.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19080.1 11 Arabidopsis thaliana 1E-140 298 68 79 0 (0) _
AT3G53410.1 11 Arabidopsis thaliana 2E-79 271 45 63 0 (0) _
AT3G09770.1 11 Arabidopsis thaliana 9E-76 271 46 62 0 (0) C
Os05g33000.2 7 Oryza sativa 1E-88 268 52 69 0 (0) M
Os05g33000.1 7 Oryza sativa 1E-88 268 52 69 0 (0) M
Os10g13670.1 7 Oryza sativa 6E-85 254 50 66 0 (0) M
Zm00001eb287460_P001 agpv5 Zea mays 2E-84 252 52 71 0 (0) _
Zm00001eb398400_P001 agpv5 Zea mays 3E-84 278 48 64 0 (0) M
Zm00001eb398400_P002 agpv5 Zea mays 3E-84 278 48 64 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-P11(1) zf-RING_11(2) z
TargetP:	Mitochondria (Class 4 C0.096; M0.634; S0.023; _0.373)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	359 aa (-cTP 355)
Molecular Weight	41.00 kDA(-cTP )
PI	5.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data