PPDB

The Plant Proteome Database

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AT3G06035.1   Glycoprotein membrane precursor GPI-anchored

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19250.1 11Arabidopsis thaliana1E-76166718043 (43)S
AT5G19240.1 11Arabidopsis thaliana4E-57177536923 (15)S
AT5G19230.1 11Arabidopsis thaliana1E-5618655653 (3)S
Os07g45060.1 7Oryza sativa3E-57165537012 (12)S
v1_GRMZM2G322618_P01 4a53Zea mays6E-5417751660 (0)S
Zm00001eb110400_P001 agpv5Zea mays6E-5417751660 (0)S
GRMZM2G322618_P01 3.21Zea mays6E-5417751660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Secreted (Class 1 C0.016; M0.018; S0.962; _0.115)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 200 aa (-cTP 177)
Molecular Weight 22.05 kDA(-cTP )
PI 4.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help