PPDB

 The Plant Proteome Database

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AT3G05950.1   RmlC-like cupins superfamily protein
Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G04200.1 11Arabidopsis thaliana1E-11622175830 (0)S
AT5G39190.1 11Arabidopsis thaliana3E-11621076871 (1)S
AT5G39160.1 11Arabidopsis thaliana5E-11621076871 (1)S
Os08g09040.1 7Oryza sativa1E-8421963710 (0)S
Os02g29000.1 7Oryza sativa2E-8422160720 (0)S
Os02g29020.1 7Oryza sativa4E-8420065770 (0)S
Zm00001eb171510_P001 agpv5Zea mays3E-8322062720 (0)S
v1_GRMZM2G149714_P01 4a53Zea mays3E-8322062725 (5)S
GRMZM2G149714_P01 3.21Zea mays3E-8322062723 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cupin_1(1) Cupin_2(1) Cupin_7(2)
TargetP: Secreted (Class 1 C0.004; M0.051; S0.973; _0.050)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 229 aa (-cTP 145)
Molecular Weight 24.74 kDA(-cTP )
PI 6.41(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help