PPDB

The Plant Proteome Database

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AT3G05930.1   germin-like protein 8

Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G26700.1 11Arabidopsis thaliana4E-9821465790 (0)S
AT1G09560.1 11Arabidopsis thaliana8E-88198647816 (15)S
AT3G62020.1 11Arabidopsis thaliana4E-83220557115 (13)S
Os05g19670.1 7Oryza sativa2E-8319760770 (0)S
Os01g14670.1 7Oryza sativa3E-8219759772 (2)S
Os03g44880.1 7Oryza sativa3E-7622253690 (0)S
v1_GRMZM2G103512_P01 4a53Zea mays3E-79196607626 (26)S
Zm00001eb332460_P001 agpv5Zea mays3E-7919660760 (0)S
GRMZM2G103512_P01 3.21Zea mays3E-79196607610 (10)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_1(1) Cupin_2(1)
TargetP: Secreted (Class 1 C0.004; M0.008; S0.988; _0.088)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 219 aa (-cTP 149)
Molecular Weight 23.03 kDA(-cTP )
PI 8.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
16247729(mature Pollen)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help