PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G05890.1   Low temperature and salt responsive protein family

Lab Annot. Low temperature and salt responsive protein
Mapman: 20.2.3 stress.abiotic.drought/salt
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05880.1 11Arabidopsis thaliana4E-265477960 (0)S
AT2G38905.1 11Arabidopsis thaliana2E-215366900 (0)S
AT1G57550.1 11Arabidopsis thaliana1E-165152880 (0)S
Os07g44180.1 7Oryza sativa6E-245377920 (0)S
Os03g25460.1 7Oryza sativa2E-215366860 (0)_
Os05g04700.1 7Oryza sativa4E-215369840 (0)S
GRMZM2G075148_P01 3.21Zea mays6E-235278880 (0)S
v1_GRMZM2G075148_P01 4a53Zea mays6E-235278880 (0)S
GRMZM2G075148_P02 3.21Zea mays9E-235278880 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pmp3(1)
TargetP: Secreted (Class 1 C0.009; M0.050; S0.990; _0.115)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 54 aa (-cTP 52)
Molecular Weight 6.08 kDA(-cTP )
PI 7.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help