PPDB

 The Plant Proteome Database

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AT3G05690.1   nuclear factor Y%2C subunit A2
Lab Annot. transcription factor (ATHAP2B/HAP2B/UNE8)
Mapman: 27.3.14 RNA.regulation of transcription.CCAAT box binding factor family, HAP2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05690.2 11Arabidopsis thaliana02951001000 (0)M
AT5G06510.1 11Arabidopsis thaliana1E-10629961680 (0)_
AT5G06510.6 11Arabidopsis thaliana1E-10629961680 (0)_
Os12g42400.2 7Oryza sativa8E-3223637530 (0)S
Os12g42400.1 7Oryza sativa8E-3223637530 (0)S
Os12g42400.3 7Oryza sativa8E-3223637530 (0)S
Zm00001eb032000_P002 agpv5Zea mays4E-2916546610 (0)C
Zm00001eb032000_P001 agpv5Zea mays4E-2916546610 (0)C
Zm00001eb256650_P003 agpv5Zea mays5E-2711052660 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CBFB_NFYA(1)
TargetP: Cytoplasm (Class 4 C0.121; M0.236; S0.052; _0.464)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 295 aa (-cTP 204)
Molecular Weight 32.14 kDA(-cTP )
PI 9.62(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 19888209(80S polysomal fraction)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help