PPDB

PPDB	The Plant Proteome Database

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AT3G05670.1 RING/U-box protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05670.3 11 Arabidopsis thaliana 0 883 100 100 0 (0) _
AT3G05670.2 11 Arabidopsis thaliana 0 883 100 100 0 (0) _
AT4G10930.2 11 Arabidopsis thaliana 3E-11 163 32 41 0 (0) _
Os03g19020.3 7 Oryza sativa 2E-72 439 39 52 0 (0) _
Os03g19020.1 7 Oryza sativa 2E-72 439 39 52 0 (0) _
Os03g19020.2 7 Oryza sativa 2E-72 439 39 52 0 (0) _
Zm00001eb396440_P006 agpv5 Zea mays 1E-76 288 48 63 0 (0) _
Zm00001eb396440_P005 agpv5 Zea mays 2E-76 288 48 63 0 (0) _
Zm00001eb396440_P004 agpv5 Zea mays 2E-76 286 48 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_IE-1(1) PHD(1) PHD_2(1) Prok-RING_4(2) zf-ANAPC11(2) zf-C3HC4(1) zf-C3HC4
TargetP:	Cytoplasm (Class 5 C0.103; M0.499; S0.038; _0.581)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	883 aa (-cTP 866)
Molecular Weight	98.78 kDA(-cTP )
PI	4.92(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data