PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G05545.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G47700.1 11 Arabidopsis thaliana 2E-46 310 39 51 0 (0) _
AT2G47700.2 11 Arabidopsis thaliana 6E-46 219 47 59 0 (0) _
AT2G15260.1 11 Arabidopsis thaliana 6E-19 119 41 57 0 (0) M
Os05g06270.1 7 Oryza sativa 7E-55 400 36 49 0 (0) _
Os01g24880.1 7 Oryza sativa 9E-49 392 33 46 0 (0) _
Os01g24880.2 7 Oryza sativa 3E-47 210 45 59 0 (0) _
Zm00001eb346030_P001 agpv5 Zea mays 1E-58 412 35 49 0 (0) _
Zm00001eb346030_P002 agpv5 Zea mays 6E-58 412 35 49 0 (0) _
GRMZM2G153250_P01 3.21 Zea mays 2E-55 222 46 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) OrfB_Zn_ribbon(2) PHD(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C
TargetP:	Cytoplasm (Class 2 C0.032; M0.113; S0.164; _0.940)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	425 aa (-cTP 343)
Molecular Weight	45.51 kDA(-cTP )
PI	5.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data