PPDB

The Plant Proteome Database

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AT3G05340.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25970.1 11Arabidopsis thaliana6E-11654836570 (0)S
AT1G11290.1 11Arabidopsis thaliana6E-11261832521 (1)C
AT2G33680.8 11Arabidopsis thaliana3E-11057934530 (0)_
Os05g05490.1 7Oryza sativa059151650 (0)_
Os01g27650.1 7Oryza sativa1E-12255537570 (0)M
Os12g36620.1 7Oryza sativa1E-12060834570 (0)_
Zm00001eb418010_P001 agpv5Zea mays060448640 (0)M
Zm00001eb418010_P002 agpv5Zea mays060448640 (0)M
Zm00001eb418010_P003 agpv5Zea mays060448640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DYW_deaminase(1) PPR(12) PPR_1(9) PPR_2(11) PPR_3(6) PPR_long(3) RPN7(3) TPR_14(
TargetP: Mitochondria (Class 5 C0.264; M0.306; S0.080; _0.101)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 658 aa (-cTP 628)
Molecular Weight 73.13 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help